Work

From current workplace (unless specified otherwise): IT department at University of Oslo

Courses and workshops held

Introduction to R and RStudio

Introduction to Machine learning in R: Classification

Introduction to Machine learning in Python: Classification

Getting started with statistics and programming using GPT UiO

Workshop: Getting up-to-speed with Python

Selected work projects

RASK: Automated HTML reports with R and Quart,o about use of antibiotics nationwide in Norway

Digikost: Automated HTML reports using RMarkdown. Data ingested from UiO Nettskjema in TSD

MinMat: Wrote R code that parses UiO Nettskjema data in TSD. Data ingested via a mobile app through UiO nettskjema. Later rewrote code to python.

iTandem: Wrote R code that parses UiO Nettskjema data in TSD. Data ingested via a mobile app through UiO nettskjema. Later rewrote code to python.

NORTRAS: Wrote an R Shiny app that vizualises data (graphs and tables) for the NORTRAS study

MinDag: Wrote an R Shiny app that creates HTML reports based on data delivered from an app (connected to UiO Nettskjema)

Talks and presentations

Crash course (Norwegian) in how to use tidymodels for building machine learning models.
From IT conference at UiO 2021

Presented NORTRAS shiny app (Norwegian) with dummy data (see projects section), at data@UiO 2022

Talk at UiO Data Manager Network october 2022 about how R is used in production in TSD.
Mentions some of the projects in Selected work projects

Talk discussing an outsider (UiO IT) perspective of the ConcePTION project.

Live coding in R (short notice backup), showcasing Educloud On Demand (run software on HPC interactively) at data@UiO 2024

Scientific articles

From my days as a PhD researcher or in my spare time

PhD

PhD thesis:
Elucidating depression heterogeneity using clinical, neuroimaging and genetic data

Article 1:
Data-driven clustering reveals a link between symptoms and functional brain connectivity in depression

Article 2:
Brain connectome mapping of complex human traits and their polygenic architecture using machine learning

Article 3:
Multimodal fusion of structural and functional brain imaging in depression using linked independent component analysis

Selected co-author papers

Inflammation and cognition in severe mental illness: patterns of covariation and subgroups

Data-driven health deficit assessment improves a frailty index’s prediction of current cognitive status and future conversion to dementia: results from ADNI